Micro-CT/XRM Academy Newsletter

 

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In this issue

  • Image of the month
  • A glimpse into Method Note 139 on physiological monitoring for the in vivo SKYSCAN systems
  • Software updates at BrukerSupport


One last newsletter for 2020 with a method note on physiological monitoring attached and a fun image of the month to brighten your day! With the holidays approaching we wish all the microCT enthusiasts a safe and healthy last weeks of a very strange year.

Image of the Month


To spread the Holiday cheer, this image of the month received a photoshop upgrade in the form of a Santa hat! This human skull was scanned in the SKYSCAN 1273 with a voxel size of 50um at 130kV and 300uA with a 1mm Cu filter. The initial image was created with CTVox, one of Bruker’s 3D.SUITE software programs.

There is not much known about this human skull other than that it was found in Antwerp. The place where it was found indicates a death of at least 250 years ago. Its missing teeth and underbite are prominent features. Underneath its Santa hat, a cut along the cranium indicates that a post-mortem examination was performed. For more info or images, please don’t hesitate to contact us! 

 

A Glimpse into Method Note 139 on Physiological Monitoring for The In Vivo SKYSCAN Systems


This past year has proven once again that in vivo imaging is an important aspect in the microCT world. Whether it is to image the lungs with or without lung pathologies, for longitudinal studies in mice or rats, one of the most important parts is following up of the animal welfare while scanning. Bruker’s in vivo microCTs have an integrated monitoring system, no third-party software or hardware is necessary. What’s more, the user and animal friendly set-up ensure minimal stress on both parties. This new MN 139 will help you remember how to use the monitoring system or give you the info you need to get started! 

As mentioned before, the monitoring system is integrated into the in vivo microCT scanners. The hardware consists of a visual camera with real time body movement detection, ECG connections with sensitive amplifier and pads, and an airflow sensor for direct breathing detection. An ambient temperature sensor and warm air heating are also included to create a complete safe and cozy environment for the anesthetized animal.

       Raw image - in XY view        

Figure 1. All connections and sensors for the animal bed of the in vivo SKYSCAN systems

 

All the physiological information is real time gathered and send to the workstation where the user can continuously monitor the animal using an integrated program, aptly named SKYSCAN Visual.  Additionally, time marks of the physiological processes can be recorded, effectively using the sensors for capturing the breathingrate and/or heartrate during the scanning process.

Figure 2. Monitoring window SKYSCAN Visual –  A mouse is positioned in the view of  the visual monitoring camera and its breathing (on video and with the breathing sensor) and cardiac rhythm (with ECG clips) are being measured.

 

The breathing of the animal can be followed up in two different ways, either using the visual camera when under inhalation anesthesia or the breathing sensor when using injection anesthesia. Both prove effective in making sure that the depth of the anesthesia is not to deep or to light. Additionally, the connection for the use of an external probe, such as an external ventilator, is also available as standard.

Figure 3. Top view of the transmission through the mouse and the ECG pads, none of the parts contain any high dense parts.

 

The heartrate can be measured using the ECG electrodes or pads. These sticky pads adhere to the paws of the animal and contain no metal, so they don’t produce artefacts. 

The ambient temperature in the animal bed can also be set and kept stable to minimize the stress of the anesthesia. Finally, the in vivo scanners have an opening on the side of their animal bed housing to give access to additional wiring, tubing… which might be necessary for your experiment. 

 

Software Updates at BrukerSupport


We have pre-registered our users at BrukerSupport.com for the distribution of documentation and software. Please log into your account and select your SKYSCAN system(s). If you did not receive an email for log-in, please apply for an account with your system serial number.
At BrukerSupport.com you'll find the latest software versions available for download. In addition, the complete library of method notes has been uploaded as well.

Most recent and planned software updates include:

Bruker is committed to provide complete XRM/Micro-CT solutions, and therefore continues to develop software in-house to complement the Bruker instruments. In order to better protect this substantial investment, a state-of-art license protection is being implemented for Bruker’s proprietary 3D.SUITE software.


NRECON V2.0 will be the first software with this new license protection. Please carefully read the FAQ at Brukersupport in case you would like to upgrade to the latest version.


Enjoy your support membership and let us know if you have any questions!

Volume 7, Issue 5
December 2020

 
 

Brukersupport: Software Updates & Method Notes

At Brukersupport.com you'll find the latest software downloads available for you. In addition, the complete library of method notes has been uploaded as well.

If you did not receive an email for log-in, please apply for an account with your system serial number. Enjoy your support membership and let us know if you have any questions!

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